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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891443.1_cds_XP_016446231.1_41108
CDS Infomation

[gene=LOC107771390] [db_xref=GeneID:107771390] [protein=DNA polymerase epsilon subunit 2-like] [protein_id=XP_016446231.1] [location=join(48703..49036,49119..49299,50019..50172,50290..50421,50880..50957,51413..51517,51622..51702,51816..51946,52032..52126,52212..52311,52582..52696,52786..52896,53351..53491)] [gbkey=CDS]
Sequence

ATGATGGATTTCCCGCCAAAATTGCGCAGACAAATACCTAAAAGCCGTCTCCCGCCTACA
CCACCACTGATATTAGATCCACAAACAGTCAAGAGAGAGAGAGAATTGCAAACGAAAATC
TATAGGTCCAGATACAGAGAGAGAATTGCAAACGAAAATCTGCAAAAAATGAGTGGAGTT
GTAAGGAACAAAGTACAGAGGAAGTTCAAGATGCGGGGTTACTCTCTCAAAGTCGACGCT
CTTTCCGAAGTCCTCTCTTTCCTTTCTCATTTTCCTTCCGATGCCCTTGACGACGCTCTT
GAACTCCTTCTCGATGAGCTGCACCATCTCTCTTTGAAATCAGCGATTCTGGACAGAGAG
CCGGTGCATAAAGTGGCGACTCTTTTATTGGAGGCAGAAGCCGCTGTTGAGGAGAACCCT
AGCTCCAGTTCATCACCTGCTTCTGCCCTTCGTGTTACTGATGCTTTTATTGTTCCTAAA
TTCCGATACGATCCTGTTAAGAAGTTCTTTCACGAGCACACAGGGCGGCTTCCCATTCAT
GGTGATGCCTCTGCAAAAGCCACCTTATATAAGGATAGATTCCTCTTATTATTCCAGAGG
TTATCTCGTGATCCACGGTTTTCAACCCTTGCTTTTGATGCCCCTACTTCAGAGTATGGC
AGCTGTGAGATATCTCCCATTCAATCTCTTGTTGGGCGAGTAGGGAGAAGATGGATAATG
GGTGTAATATCTCAGTTGGAGGATGGTCATTTCTACTTGGAAGACCTTACTGCAGCTGTC
GAAGTTAATTTATCGAGTGCAAAGATAACTACAGGTTTCTTTGCGGAAAATACAATAGTC
CTGGCAGAAGGTGAAATGCAGTTGGATGGTGTTTTTCAGGTCAGGACATGTGGATTTCCT
CCATTAGAGGACAGAGAAAAGTCCATGGCATTTTTTTCAGGACTAGACTTCTTTGGTGGT
GGTATTCTTACCAAAGAGGAAACTCTTAGACTTGCAGAGCTGGAGAAAAAAGCTGTGAAT
GACATGTTTGTTATACTATCTGATATCTGGCTGGACAATGAGGAGACTTTGGGAAATCTG
GAGACTATCCTCAATGGTTATGAAAATGTAGAGGTGGTTCCTTCTTTATTTGTCCTCATG
GGAAATTTCTGCTCTCAGCCATTTAATCTCTCCTTCAAGTCGATCTCAAGTCTCAGGGTT
CAGTTTGGAAAGCTTGGGCAAATGATTGCCTCGCACCAACGACTAAAAGAGCATAGTCGA
TTTCTGTTTATCCCTGGTCCAGATGATGTAGGTCCTTCAACAGTCTTACCCAGATGTCCT
TTGCCTAAATACTTAACTGAAGAACTTCAGAAATATGTTCCCAATGCAATATTCTCCAGT
AACCCATGCAGAATCAAGTTTTATACCCAAGAAATTGTACTATTCCGCCAAGATTTGCTT
TATAGAATGCGAAGGTCATGTCTGATACCCCCCTCAACAGAAGAAACCAGTGATCCATTT
GAGCATCTTGTTGCAACGATAATACATCAGAGCCATCTCTGCCCCCTTCCTTTGGCAGGT
CAACCCATTATCTGGAATTATGATCACAGTCTACACCTTTATCCAACCCCGCATACGATA
GTGTTGGCGGACAAAAGTGAGCAGAAGGCCTTCAGGTACACTGGAGTTACATGCTTTAAT
CCTGGTTCCTTCTCAACTGATGGCACATTTGTGGCATATCGGCCGTGCAATCAGGAAGTA
GAACTCTCAGCATTGTAA

Peptide Sequence

PEP ID

XP_016446231.1
PEP Infomation

PREDICTED: DNA polymerase epsilon subunit 2-like [Nicotiana tabacum]
Sequence

MMDFPPKLRRQIPKSRLPPTPPLILDPQTVKRERELQTKIYRSRYRERIANENLQKMSGV
VRNKVQRKFKMRGYSLKVDALSEVLSFLSHFPSDALDDALELLLDELHHLSLKSAILDRE
PVHKVATLLLEAEAAVEENPSSSSSPASALRVTDAFIVPKFRYDPVKKFFHEHTGRLPIH
GDASAKATLYKDRFLLLFQRLSRDPRFSTLAFDAPTSEYGSCEISPIQSLVGRVGRRWIM
GVISQLEDGHFYLEDLTAAVEVNLSSAKITTGFFAENTIVLAEGEMQLDGVFQVRTCGFP
PLEDREKSMAFFSGLDFFGGGILTKEETLRLAELEKKAVNDMFVILSDIWLDNEETLGNL
ETILNGYENVEVVPSLFVLMGNFCSQPFNLSFKSISSLRVQFGKLGQMIASHQRLKEHSR
FLFIPGPDDVGPSTVLPRCPLPKYLTEELQKYVPNAIFSSNPCRIKFYTQEIVLFRQDLL
YRMRRSCLIPPSTEETSDPFEHLVATIIHQSHLCPLPLAGQPIIWNYDHSLHLYPTPHTI
VLADKSEQKAFRYTGVTCFNPGSFSTDGTFVAYRPCNQEVELSAL

Transcript Sequence

Gene sequence data has not been registered.